Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim43bP86448 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim43bP86448 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim43bP86448 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.49■□□□□ 0.55
Trim43bP86448 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43bP86448 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim43bP86448 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim43bP86448 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Trim43bP86448 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim43bP86448 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim43bP86448 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trim43bP86448 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim43bP86448 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43bP86448 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Trim43bP86448 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.47■□□□□ 0.55
Trim43bP86448 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43bP86448 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.47■□□□□ 0.55
Trim43bP86448 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim43bP86448 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim43bP86448 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim43bP86448 Gm29257-201ENSMUST00000186115 639 ntBASIC18.46■□□□□ 0.55
Trim43bP86448 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.46■□□□□ 0.55
Trim43bP86448 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim43bP86448 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Trim43bP86448 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.46■□□□□ 0.55
Trim43bP86448 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43bP86448 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim43bP86448 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim43bP86448 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim43bP86448 Gm7290-201ENSMUST00000104990 617 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Gm12918-201ENSMUST00000120234 636 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Gm7860-201ENSMUST00000121190 879 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Gm15710-201ENSMUST00000121821 636 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Gm38205-201ENSMUST00000192243 258 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Gm5075-201ENSMUST00000196916 622 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Trim43bP86448 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.45■□□□□ 0.54
Trim43bP86448 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim43bP86448 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43bP86448 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim43bP86448 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim43bP86448 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43bP86448 Gm13534-201ENSMUST00000121169 513 ntBASIC18.44■□□□□ 0.54
Trim43bP86448 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim43bP86448 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43bP86448 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43bP86448 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43bP86448 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trim43bP86448 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43bP86448 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms