Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shox2P70390 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shox2P70390 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shox2P70390 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shox2P70390 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shox2P70390 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shox2P70390 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Shox2P70390 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.8■□□□□ 0.44
Shox2P70390 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.8■□□□□ 0.44
Shox2P70390 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.8■□□□□ 0.44
Shox2P70390 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shox2P70390 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.8■□□□□ 0.44
Shox2P70390 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Shox2P70390 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
Shox2P70390 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shox2P70390 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.79■□□□□ 0.44
Shox2P70390 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shox2P70390 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.79■□□□□ 0.44
Shox2P70390 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shox2P70390 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shox2P70390 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shox2P70390 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shox2P70390 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shox2P70390 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
Shox2P70390 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.78■□□□□ 0.44
Shox2P70390 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.78■□□□□ 0.44
Shox2P70390 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.78■□□□□ 0.44
Shox2P70390 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shox2P70390 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Shox2P70390 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Shox2P70390 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Shox2P70390 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.78■□□□□ 0.44
Shox2P70390 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shox2P70390 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Shox2P70390 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Shox2P70390 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shox2P70390 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shox2P70390 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shox2P70390 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shox2P70390 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Shox2P70390 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shox2P70390 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shox2P70390 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Shox2P70390 Gm22238-201ENSMUST00000175222 88 ntBASIC17.76■□□□□ 0.43
Shox2P70390 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shox2P70390 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.76■□□□□ 0.43
Shox2P70390 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms