Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Casp4P70343 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Casp4P70343 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casp4P70343 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Casp4P70343 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casp4P70343 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casp4P70343 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casp4P70343 Gm5408-201ENSMUST00000197998 747 ntBASIC18.83■□□□□ 0.6
Casp4P70343 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Casp4P70343 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Casp4P70343 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casp4P70343 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Casp4P70343 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casp4P70343 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Casp4P70343 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casp4P70343 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casp4P70343 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.83■□□□□ 0.6
Casp4P70343 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Casp4P70343 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.82■□□□□ 0.6
Casp4P70343 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.82■□□□□ 0.6
Casp4P70343 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Casp4P70343 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Casp4P70343 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Casp4P70343 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Casp4P70343 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.81■□□□□ 0.6
Casp4P70343 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.81■□□□□ 0.6
Casp4P70343 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.81■□□□□ 0.6
Casp4P70343 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Casp4P70343 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Casp4P70343 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casp4P70343 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.8■□□□□ 0.6
Casp4P70343 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.8■□□□□ 0.6
Casp4P70343 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.8■□□□□ 0.6
Casp4P70343 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Casp4P70343 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Casp4P70343 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.8■□□□□ 0.6
Casp4P70343 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Casp4P70343 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.79■□□□□ 0.6
Casp4P70343 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Casp4P70343 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.79■□□□□ 0.6
Casp4P70343 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Casp4P70343 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.79■□□□□ 0.6
Casp4P70343 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Casp4P70343 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Casp4P70343 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Casp4P70343 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Casp4P70343 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Casp4P70343 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Casp4P70343 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.78■□□□□ 0.6
Casp4P70343 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Casp4P70343 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms