Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sec61a1P61620 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.84■□□□□ 0.13
Sec61a1P61620 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
Sec61a1P61620 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.84■□□□□ 0.13
Sec61a1P61620 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sec61a1P61620 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Sec61a1P61620 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sec61a1P61620 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sec61a1P61620 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sec61a1P61620 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Sec61a1P61620 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Sec61a1P61620 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.83■□□□□ 0.12
Sec61a1P61620 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sec61a1P61620 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sec61a1P61620 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.82■□□□□ 0.12
Sec61a1P61620 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sec61a1P61620 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.82■□□□□ 0.12
Sec61a1P61620 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Sec61a1P61620 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.82■□□□□ 0.12
Sec61a1P61620 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sec61a1P61620 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sec61a1P61620 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sec61a1P61620 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.81■□□□□ 0.12
Sec61a1P61620 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.81■□□□□ 0.12
Sec61a1P61620 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sec61a1P61620 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.81■□□□□ 0.12
Sec61a1P61620 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.81■□□□□ 0.12
Sec61a1P61620 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.8■□□□□ 0.12
Sec61a1P61620 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sec61a1P61620 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.8■□□□□ 0.12
Sec61a1P61620 Gm7514-201ENSMUST00000209475 934 ntBASIC15.8■□□□□ 0.12
Sec61a1P61620 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Sec61a1P61620 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sec61a1P61620 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sec61a1P61620 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a1P61620 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Sec61a1P61620 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.79■□□□□ 0.12
Sec61a1P61620 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms