Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tm6sf1P58749 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Tm6sf1P58749 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tm6sf1P58749 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Idnk-204ENSMUST00000226010 1898 ntBASIC22.16■■□□□ 1.14
Tm6sf1P58749 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC22.16■■□□□ 1.14
Tm6sf1P58749 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf1P58749 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.15■■□□□ 1.14
Tm6sf1P58749 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf1P58749 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Tm6sf1P58749 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tm6sf1P58749 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Gm10138-203ENSMUST00000206952 366 ntBASIC22.14■■□□□ 1.13
Tm6sf1P58749 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Tm6sf1P58749 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf1P58749 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Rarb-207ENSMUST00000225921 2756 ntBASIC22.12■■□□□ 1.13
Tm6sf1P58749 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.12■■□□□ 1.13
Tm6sf1P58749 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.12■■□□□ 1.13
Tm6sf1P58749 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf1P58749 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Tm6sf1P58749 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.11■■□□□ 1.13
Tm6sf1P58749 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf1P58749 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tm6sf1P58749 Gm13158-201ENSMUST00000122007 736 ntBASIC22.1■■□□□ 1.13
Tm6sf1P58749 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.1■■□□□ 1.13
Tm6sf1P58749 Gm10653-202ENSMUST00000139570 835 ntBASIC22.1■■□□□ 1.13
Tm6sf1P58749 Mir6349-201ENSMUST00000184059 97 ntBASIC22.1■■□□□ 1.13
Tm6sf1P58749 Trmt13-210ENSMUST00000198454 880 ntBASIC22.1■■□□□ 1.13
Tm6sf1P58749 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tm6sf1P58749 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tm6sf1P58749 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tm6sf1P58749 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms