Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cks2P56390 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cks2P56390 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cks2P56390 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks2P56390 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cks2P56390 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cks2P56390 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cks2P56390 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cks2P56390 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Gm43017-201ENSMUST00000198296 752 ntBASIC15.05■□□□□ -0
Cks2P56390 Gm8969-201ENSMUST00000199694 526 ntBASIC15.05■□□□□ -0
Cks2P56390 Gm43060-201ENSMUST00000200621 289 ntBASIC15.05■□□□□ -0
Cks2P56390 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.05■□□□□ -0
Cks2P56390 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cks2P56390 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cks2P56390 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks2P56390 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cks2P56390 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cks2P56390 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cks2P56390 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.04■□□□□ -0
Cks2P56390 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.04■□□□□ -0
Cks2P56390 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cks2P56390 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.04■□□□□ -0
Cks2P56390 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cks2P56390 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cks2P56390 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cks2P56390 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cks2P56390 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.03■□□□□ -0
Cks2P56390 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.03■□□□□ -0
Cks2P56390 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.03■□□□□ -0
Cks2P56390 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.03■□□□□ -0
Cks2P56390 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks2P56390 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cks2P56390 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.02■□□□□ -0
Cks2P56390 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.02■□□□□ -0
Cks2P56390 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cks2P56390 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cks2P56390 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.02■□□□□ -0
Cks2P56390 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.02■□□□□ -0
Cks2P56390 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cks2P56390 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cks2P56390 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cks2P56390 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.02□□□□□ -0.01
Cks2P56390 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.02□□□□□ -0.01
Cks2P56390 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cks2P56390 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cks2P56390 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.01□□□□□ -0.01
Cks2P56390 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks2P56390 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks2P56390 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cks2P56390 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks2P56390 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Cks2P56390 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks2P56390 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms