Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nub1P54729 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.35■□□□□ 0.69
Nub1P54729 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.34■□□□□ 0.69
Nub1P54729 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Nub1P54729 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.34■□□□□ 0.69
Nub1P54729 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.34■□□□□ 0.69
Nub1P54729 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.34■□□□□ 0.69
Nub1P54729 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nub1P54729 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.34■□□□□ 0.69
Nub1P54729 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.34■□□□□ 0.69
Nub1P54729 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nub1P54729 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.34■□□□□ 0.69
Nub1P54729 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nub1P54729 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.33■□□□□ 0.69
Nub1P54729 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nub1P54729 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nub1P54729 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Fst-202ENSMUST00000223640 2612 ntBASIC19.33■□□□□ 0.68
Nub1P54729 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nub1P54729 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nub1P54729 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nub1P54729 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.32■□□□□ 0.68
Nub1P54729 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.32■□□□□ 0.68
Nub1P54729 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nub1P54729 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.32■□□□□ 0.68
Nub1P54729 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
Nub1P54729 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nub1P54729 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.31■□□□□ 0.68
Nub1P54729 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nub1P54729 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.31■□□□□ 0.68
Nub1P54729 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.31■□□□□ 0.68
Nub1P54729 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Gm12527-201ENSMUST00000117967 564 ntBASIC19.31■□□□□ 0.68
Nub1P54729 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.31■□□□□ 0.68
Nub1P54729 Gm20049-201ENSMUST00000219950 730 ntBASIC19.31■□□□□ 0.68
Nub1P54729 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nub1P54729 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Gm12896-201ENSMUST00000118430 226 ntBASIC19.3■□□□□ 0.68
Nub1P54729 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 Tgds-204ENSMUST00000228543 1594 ntBASIC19.3■□□□□ 0.68
Nub1P54729 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.3■□□□□ 0.68
Nub1P54729 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nub1P54729 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nub1P54729 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
Nub1P54729 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nub1P54729 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nub1P54729 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nub1P54729 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nub1P54729 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms