Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.43■□□□□ 0.38
Lbx1P52955 Gm2651-201ENSMUST00000203560 838 ntBASIC17.43■□□□□ 0.38
Lbx1P52955 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.43■□□□□ 0.38
Lbx1P52955 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lbx1P52955 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lbx1P52955 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.42■□□□□ 0.38
Lbx1P52955 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lbx1P52955 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Lbx1P52955 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lbx1P52955 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lbx1P52955 Gm11355-201ENSMUST00000121120 306 ntBASIC17.42■□□□□ 0.38
Lbx1P52955 Gm10052-201ENSMUST00000168019 960 ntBASIC17.42■□□□□ 0.38
Lbx1P52955 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.42■□□□□ 0.38
Lbx1P52955 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.42■□□□□ 0.38
Lbx1P52955 Gm7729-201ENSMUST00000050143 801 ntBASIC17.42■□□□□ 0.38
Lbx1P52955 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.42■□□□□ 0.38
Lbx1P52955 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lbx1P52955 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.41■□□□□ 0.38
Lbx1P52955 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.41■□□□□ 0.38
Lbx1P52955 Gm14057-201ENSMUST00000120631 482 ntBASIC17.41■□□□□ 0.38
Lbx1P52955 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lbx1P52955 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lbx1P52955 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lbx1P52955 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.41■□□□□ 0.38
Lbx1P52955 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lbx1P52955 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lbx1P52955 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Gm10418-201ENSMUST00000100943 576 ntBASIC17.4■□□□□ 0.38
Lbx1P52955 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.4■□□□□ 0.38
Lbx1P52955 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.4■□□□□ 0.38
Lbx1P52955 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lbx1P52955 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lbx1P52955 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lbx1P52955 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lbx1P52955 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lbx1P52955 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lbx1P52955 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.39■□□□□ 0.37
Lbx1P52955 Gm1401-201ENSMUST00000122048 772 ntBASIC17.39■□□□□ 0.37
Lbx1P52955 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.39■□□□□ 0.37
Lbx1P52955 Mir1668-201ENSMUST00000184114 107 ntBASIC17.39■□□□□ 0.37
Lbx1P52955 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.39■□□□□ 0.37
Lbx1P52955 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lbx1P52955 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lbx1P52955 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Lbx1P52955 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lbx1P52955 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lbx1P52955 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lbx1P52955 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.38■□□□□ 0.37
Lbx1P52955 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Lbx1P52955 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lbx1P52955 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lbx1P52955 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lbx1P52955 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.37■□□□□ 0.37
Lbx1P52955 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lbx1P52955 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lbx1P52955 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lbx1P52955 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lbx1P52955 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lbx1P52955 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms