Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.34■□□□□ 0.05
Hmga2P52927 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.34■□□□□ 0.05
Hmga2P52927 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmga2P52927 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hmga2P52927 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmga2P52927 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hmga2P52927 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmga2P52927 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.33■□□□□ 0.05
Hmga2P52927 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmga2P52927 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmga2P52927 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.33■□□□□ 0.04
Hmga2P52927 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmga2P52927 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmga2P52927 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Hmga2P52927 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmga2P52927 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hmga2P52927 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hmga2P52927 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmga2P52927 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmga2P52927 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmga2P52927 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmga2P52927 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.32■□□□□ 0.04
Hmga2P52927 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.32■□□□□ 0.04
Hmga2P52927 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmga2P52927 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmga2P52927 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmga2P52927 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hmga2P52927 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hmga2P52927 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmga2P52927 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.31■□□□□ 0.04
Hmga2P52927 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmga2P52927 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmga2P52927 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Hmga2P52927 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Hmga2P52927 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Idnk-204ENSMUST00000226010 1898 ntBASIC15.31■□□□□ 0.04
Hmga2P52927 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmga2P52927 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Hmga2P52927 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmga2P52927 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmga2P52927 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmga2P52927 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms