Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdx2P43241 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdx2P43241 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdx2P43241 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdx2P43241 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdx2P43241 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdx2P43241 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdx2P43241 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdx2P43241 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.12■□□□□ 0.33
Cdx2P43241 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Cdx2P43241 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdx2P43241 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.12■□□□□ 0.33
Cdx2P43241 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdx2P43241 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdx2P43241 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cdx2P43241 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdx2P43241 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
Cdx2P43241 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Cdx2P43241 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdx2P43241 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdx2P43241 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdx2P43241 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdx2P43241 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.1■□□□□ 0.33
Cdx2P43241 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.1■□□□□ 0.33
Cdx2P43241 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdx2P43241 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdx2P43241 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdx2P43241 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdx2P43241 Gm27741-201ENSMUST00000185060 237 ntBASIC17.09■□□□□ 0.33
Cdx2P43241 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdx2P43241 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdx2P43241 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdx2P43241 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdx2P43241 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdx2P43241 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.08■□□□□ 0.32
Cdx2P43241 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdx2P43241 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdx2P43241 Gm22697-201ENSMUST00000175194 63 ntBASIC17.08■□□□□ 0.32
Cdx2P43241 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Gm18101-201ENSMUST00000215769 548 ntBASIC17.08■□□□□ 0.32
Cdx2P43241 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdx2P43241 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdx2P43241 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdx2P43241 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdx2P43241 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdx2P43241 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdx2P43241 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdx2P43241 Gm4974-201ENSMUST00000209974 875 ntBASIC17.07■□□□□ 0.32
Cdx2P43241 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms