Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Cdh4P39038 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh4P39038 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh4P39038 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cdh4P39038 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cdh4P39038 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh4P39038 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh4P39038 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cdh4P39038 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cdh4P39038 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cdh4P39038 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdh4P39038 Gm10653-202ENSMUST00000139570 835 ntBASIC17.21■□□□□ 0.35
Cdh4P39038 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Gm37856-201ENSMUST00000191634 999 ntBASIC17.21■□□□□ 0.35
Cdh4P39038 Trmt13-210ENSMUST00000198454 880 ntBASIC17.21■□□□□ 0.35
Cdh4P39038 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdh4P39038 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh4P39038 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cdh4P39038 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.2■□□□□ 0.34
Cdh4P39038 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cdh4P39038 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Gm20760-201ENSMUST00000179197 648 ntBASIC17.2■□□□□ 0.34
Cdh4P39038 Gm27275-201ENSMUST00000184318 272 ntBASIC17.2■□□□□ 0.34
Cdh4P39038 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdh4P39038 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.2■□□□□ 0.34
Cdh4P39038 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh4P39038 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdh4P39038 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Gm27011-201ENSMUST00000182352 972 ntBASIC17.19■□□□□ 0.34
Cdh4P39038 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdh4P39038 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.19■□□□□ 0.34
Cdh4P39038 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh4P39038 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdh4P39038 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cdh4P39038 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Zfp783-201ENSMUST00000095946 670 ntBASIC17.18■□□□□ 0.34
Cdh4P39038 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.18■□□□□ 0.34
Cdh4P39038 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdh4P39038 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Cdh4P39038 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh4P39038 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.17■□□□□ 0.34
Cdh4P39038 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Gm11927-201ENSMUST00000118472 759 ntBASIC17.17■□□□□ 0.34
Cdh4P39038 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cdh4P39038 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms