Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Sox5P35710 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sox5P35710 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox5P35710 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Sox5P35710 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox5P35710 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.66■□□□□ 0.74
Sox5P35710 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Sox5P35710 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox5P35710 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Sox5P35710 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.65■□□□□ 0.74
Sox5P35710 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sox5P35710 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.65■□□□□ 0.74
Sox5P35710 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sox5P35710 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sox5P35710 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox5P35710 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.64■□□□□ 0.74
Sox5P35710 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sox5P35710 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox5P35710 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox5P35710 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sox5P35710 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox5P35710 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox5P35710 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Sox5P35710 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sox5P35710 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox5P35710 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.63■□□□□ 0.73
Sox5P35710 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.63■□□□□ 0.73
Sox5P35710 Gm6420-201ENSMUST00000193885 723 ntBASIC19.63■□□□□ 0.73
Sox5P35710 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox5P35710 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.63■□□□□ 0.73
Sox5P35710 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox5P35710 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.62■□□□□ 0.73
Sox5P35710 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Sox5P35710 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sox5P35710 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox5P35710 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox5P35710 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox5P35710 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox5P35710 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sox5P35710 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.61■□□□□ 0.73
Sox5P35710 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Idnk-204ENSMUST00000226010 1898 ntBASIC19.61■□□□□ 0.73
Sox5P35710 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Nespas-201ENSMUST00000143738 1083 ntBASIC19.61■□□□□ 0.73
Sox5P35710 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sox5P35710 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox5P35710 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms