Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.65■□□□□ 0.26
Foxa1P35582 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.65■□□□□ 0.26
Foxa1P35582 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Foxa1P35582 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Foxa1P35582 Dio3-201ENSMUST00000097228 1449 ntBASIC16.64■□□□□ 0.25
Foxa1P35582 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Gm11927-201ENSMUST00000118472 759 ntBASIC16.64■□□□□ 0.25
Foxa1P35582 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.64■□□□□ 0.25
Foxa1P35582 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.64■□□□□ 0.25
Foxa1P35582 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Zfp783-201ENSMUST00000095946 670 ntBASIC16.64■□□□□ 0.25
Foxa1P35582 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxa1P35582 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Foxa1P35582 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.63■□□□□ 0.25
Foxa1P35582 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Gm38285-201ENSMUST00000192928 922 ntBASIC16.63■□□□□ 0.25
Foxa1P35582 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Foxa1P35582 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Foxa1P35582 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Foxa1P35582 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.63■□□□□ 0.25
Foxa1P35582 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxa1P35582 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Foxa1P35582 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Gm12527-201ENSMUST00000117967 564 ntBASIC16.62■□□□□ 0.25
Foxa1P35582 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Foxa1P35582 Gm27275-201ENSMUST00000184318 272 ntBASIC16.62■□□□□ 0.25
Foxa1P35582 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Foxa1P35582 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxa1P35582 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Foxa1P35582 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.61■□□□□ 0.25
Foxa1P35582 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Foxa1P35582 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxa1P35582 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Foxa1P35582 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Foxa1P35582 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Foxa1P35582 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Foxa1P35582 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms