Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.07■□□□□ 0.32
Slc6a11P31650 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Slc6a11P31650 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
Slc6a11P31650 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc6a11P31650 Gm4968-201ENSMUST00000071458 858 ntBASIC17.07■□□□□ 0.32
Slc6a11P31650 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc6a11P31650 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Slc6a11P31650 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a11P31650 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a11P31650 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a11P31650 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc6a11P31650 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc6a11P31650 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc6a11P31650 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.06■□□□□ 0.32
Slc6a11P31650 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a11P31650 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a11P31650 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc6a11P31650 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a11P31650 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a11P31650 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a11P31650 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc6a11P31650 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a11P31650 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Slc6a11P31650 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Slc6a11P31650 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a11P31650 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Gm22325-201ENSMUST00000158904 308 ntBASIC17.03■□□□□ 0.32
Slc6a11P31650 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.03■□□□□ 0.32
Slc6a11P31650 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc6a11P31650 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a11P31650 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms