Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Gm12085-201ENSMUST00000119263 940 ntBASIC20.81■□□□□ 0.92
Vcam1P29533 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.81■□□□□ 0.92
Vcam1P29533 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.8■□□□□ 0.92
Vcam1P29533 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vcam1P29533 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.8■□□□□ 0.92
Vcam1P29533 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcam1P29533 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.8■□□□□ 0.92
Vcam1P29533 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vcam1P29533 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.79■□□□□ 0.92
Vcam1P29533 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcam1P29533 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vcam1P29533 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vcam1P29533 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.78■□□□□ 0.92
Vcam1P29533 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vcam1P29533 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Vcam1P29533 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcam1P29533 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.78■□□□□ 0.92
Vcam1P29533 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.77■□□□□ 0.92
Vcam1P29533 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.77■□□□□ 0.92
Vcam1P29533 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.77■□□□□ 0.92
Vcam1P29533 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.77■□□□□ 0.92
Vcam1P29533 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vcam1P29533 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.77■□□□□ 0.92
Vcam1P29533 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vcam1P29533 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vcam1P29533 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.77■□□□□ 0.91
Vcam1P29533 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vcam1P29533 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.76■□□□□ 0.91
Vcam1P29533 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Vcam1P29533 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vcam1P29533 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vcam1P29533 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcam1P29533 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcam1P29533 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Vcam1P29533 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcam1P29533 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.75■□□□□ 0.91
Vcam1P29533 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcam1P29533 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.75■□□□□ 0.91
Vcam1P29533 Gm38027-201ENSMUST00000192315 235 ntBASIC20.75■□□□□ 0.91
Vcam1P29533 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.75■□□□□ 0.91
Vcam1P29533 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vcam1P29533 Gm13401-201ENSMUST00000117074 291 ntBASIC20.74■□□□□ 0.91
Vcam1P29533 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Vcam1P29533 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vcam1P29533 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.74■□□□□ 0.91
Vcam1P29533 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcam1P29533 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.74■□□□□ 0.91
Vcam1P29533 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcam1P29533 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vcam1P29533 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vcam1P29533 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vcam1P29533 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Vcam1P29533 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.73■□□□□ 0.91
Vcam1P29533 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Vcam1P29533 Gm4974-201ENSMUST00000209974 875 ntBASIC20.73■□□□□ 0.91
Vcam1P29533 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Vcam1P29533 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms