Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpl3P27659 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.11■□□□□ 0.33
Rpl3P27659 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rpl3P27659 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl3P27659 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Rpl3P27659 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpl3P27659 Gm8969-201ENSMUST00000199694 526 ntBASIC17.1■□□□□ 0.33
Rpl3P27659 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpl3P27659 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rpl3P27659 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rpl3P27659 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl3P27659 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rpl3P27659 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rpl3P27659 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpl3P27659 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
Rpl3P27659 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpl3P27659 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl3P27659 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rpl3P27659 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rpl3P27659 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl3P27659 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.08■□□□□ 0.33
Rpl3P27659 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 Fst-202ENSMUST00000223640 2612 ntBASIC17.08■□□□□ 0.32
Rpl3P27659 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl3P27659 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.07■□□□□ 0.32
Rpl3P27659 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.07■□□□□ 0.32
Rpl3P27659 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.07■□□□□ 0.32
Rpl3P27659 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl3P27659 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rpl3P27659 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rpl3P27659 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rpl3P27659 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.06■□□□□ 0.32
Rpl3P27659 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl3P27659 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpl3P27659 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Rarb-207ENSMUST00000225921 2756 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Gm7290-201ENSMUST00000104990 617 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Gm12918-201ENSMUST00000120234 636 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Gm15710-201ENSMUST00000121821 636 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Gm5075-201ENSMUST00000196916 622 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl3P27659 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpl3P27659 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.05■□□□□ 0.32
Rpl3P27659 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl3P27659 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl3P27659 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms