Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.3■□□□□ 0.2
Cd40P27512 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cd40P27512 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.3■□□□□ 0.2
Cd40P27512 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cd40P27512 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.29■□□□□ 0.2
Cd40P27512 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cd40P27512 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd40P27512 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd40P27512 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.28■□□□□ 0.2
Cd40P27512 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.28■□□□□ 0.2
Cd40P27512 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.28■□□□□ 0.2
Cd40P27512 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd40P27512 Fst-202ENSMUST00000223640 2612 ntBASIC16.28■□□□□ 0.2
Cd40P27512 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd40P27512 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.27■□□□□ 0.2
Cd40P27512 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.27■□□□□ 0.2
Cd40P27512 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.27■□□□□ 0.2
Cd40P27512 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd40P27512 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd40P27512 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd40P27512 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
Cd40P27512 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Gm11249-201ENSMUST00000117071 859 ntBASIC16.26■□□□□ 0.19
Cd40P27512 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.26■□□□□ 0.19
Cd40P27512 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd40P27512 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cd40P27512 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd40P27512 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.25■□□□□ 0.19
Cd40P27512 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cd40P27512 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd40P27512 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.25■□□□□ 0.19
Cd40P27512 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms