Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nfkb1P25799 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.48■□□□□ 0.55
Nfkb1P25799 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nfkb1P25799 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.48■□□□□ 0.55
Nfkb1P25799 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nfkb1P25799 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nfkb1P25799 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.47■□□□□ 0.55
Nfkb1P25799 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.47■□□□□ 0.55
Nfkb1P25799 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Nfkb1P25799 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nfkb1P25799 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nfkb1P25799 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nfkb1P25799 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nfkb1P25799 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nfkb1P25799 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.45■□□□□ 0.54
Nfkb1P25799 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nfkb1P25799 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nfkb1P25799 Gm15565-201ENSMUST00000118890 427 ntBASIC18.45■□□□□ 0.54
Nfkb1P25799 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Mir5122-201ENSMUST00000175004 89 ntBASIC18.45■□□□□ 0.54
Nfkb1P25799 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nfkb1P25799 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.45■□□□□ 0.54
Nfkb1P25799 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.45■□□□□ 0.54
Nfkb1P25799 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nfkb1P25799 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nfkb1P25799 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.44■□□□□ 0.54
Nfkb1P25799 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.44■□□□□ 0.54
Nfkb1P25799 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Nfkb1P25799 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.44■□□□□ 0.54
Nfkb1P25799 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.44■□□□□ 0.54
Nfkb1P25799 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nfkb1P25799 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.43■□□□□ 0.54
Nfkb1P25799 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nfkb1P25799 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms