Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf8P23611 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf8P23611 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf8P23611 Mir2861-201ENSMUST00000175539 82 ntBASIC19.43■□□□□ 0.7
Irf8P23611 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf8P23611 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf8P23611 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.43■□□□□ 0.7
Irf8P23611 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Grk6-206ENSMUST00000224995 2971 ntBASIC19.42■□□□□ 0.7
Irf8P23611 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Irf8P23611 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Irf8P23611 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.42■□□□□ 0.7
Irf8P23611 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.42■□□□□ 0.7
Irf8P23611 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf8P23611 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.41■□□□□ 0.7
Irf8P23611 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Irf8P23611 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.41■□□□□ 0.7
Irf8P23611 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.41■□□□□ 0.7
Irf8P23611 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf8P23611 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Irf8P23611 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.4■□□□□ 0.7
Irf8P23611 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf8P23611 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf8P23611 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf8P23611 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf8P23611 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Irf8P23611 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
Irf8P23611 Gm15375-201ENSMUST00000119510 849 ntBASIC19.39■□□□□ 0.69
Irf8P23611 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Irf8P23611 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.39■□□□□ 0.69
Irf8P23611 Gm18666-201ENSMUST00000190039 958 ntBASIC19.39■□□□□ 0.69
Irf8P23611 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.39■□□□□ 0.69
Irf8P23611 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Irf8P23611 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf8P23611 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Gm10418-201ENSMUST00000100943 576 ntBASIC19.38■□□□□ 0.69
Irf8P23611 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.38■□□□□ 0.69
Irf8P23611 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.38■□□□□ 0.69
Irf8P23611 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Gm20760-201ENSMUST00000179197 648 ntBASIC19.38■□□□□ 0.69
Irf8P23611 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf8P23611 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.38■□□□□ 0.69
Irf8P23611 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.37■□□□□ 0.69
Irf8P23611 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Irf8P23611 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.37■□□□□ 0.69
Irf8P23611 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Irf8P23611 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Irf8P23611 Gm10653-202ENSMUST00000139570 835 ntBASIC19.37■□□□□ 0.69
Irf8P23611 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.37■□□□□ 0.69
Irf8P23611 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Irf8P23611 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Irf8P23611 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms