Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6bP23440 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Pde6bP23440 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.56■□□□□ 0.72
Pde6bP23440 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Gm15375-201ENSMUST00000119510 849 ntBASIC19.56■□□□□ 0.72
Pde6bP23440 Gm38285-201ENSMUST00000192928 922 ntBASIC19.56■□□□□ 0.72
Pde6bP23440 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.56■□□□□ 0.72
Pde6bP23440 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Pde6bP23440 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pde6bP23440 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.55■□□□□ 0.72
Pde6bP23440 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.55■□□□□ 0.72
Pde6bP23440 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Gm9987-201ENSMUST00000069768 567 ntBASIC19.55■□□□□ 0.72
Pde6bP23440 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.55■□□□□ 0.72
Pde6bP23440 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6bP23440 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pde6bP23440 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.54■□□□□ 0.72
Pde6bP23440 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.54■□□□□ 0.72
Pde6bP23440 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.54■□□□□ 0.72
Pde6bP23440 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pde6bP23440 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pde6bP23440 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6bP23440 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pde6bP23440 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pde6bP23440 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pde6bP23440 Gm18025-201ENSMUST00000221733 862 ntBASIC19.53■□□□□ 0.72
Pde6bP23440 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Pde6bP23440 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6bP23440 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6bP23440 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pde6bP23440 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6bP23440 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.52■□□□□ 0.72
Pde6bP23440 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.52■□□□□ 0.72
Pde6bP23440 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.52■□□□□ 0.72
Pde6bP23440 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pde6bP23440 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6bP23440 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6bP23440 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.52■□□□□ 0.72
Pde6bP23440 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
Pde6bP23440 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6bP23440 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pde6bP23440 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Gm42545-201ENSMUST00000202755 922 ntBASIC19.51■□□□□ 0.71
Pde6bP23440 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.51■□□□□ 0.71
Pde6bP23440 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pde6bP23440 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Pde6bP23440 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6bP23440 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Pde6bP23440 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms