Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tpm3P21107 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.21■□□□□ 0.83
Tpm3P21107 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Tpm3P21107 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tpm3P21107 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.21■□□□□ 0.83
Tpm3P21107 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tpm3P21107 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tpm3P21107 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.2■□□□□ 0.82
Tpm3P21107 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tpm3P21107 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.19■□□□□ 0.82
Tpm3P21107 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Tpm3P21107 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Gm7860-201ENSMUST00000121190 879 ntBASIC20.19■□□□□ 0.82
Tpm3P21107 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tpm3P21107 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.19■□□□□ 0.82
Tpm3P21107 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Tpm3P21107 Tgds-204ENSMUST00000228543 1594 ntBASIC20.19■□□□□ 0.82
Tpm3P21107 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.19■□□□□ 0.82
Tpm3P21107 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.19■□□□□ 0.82
Tpm3P21107 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tpm3P21107 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tpm3P21107 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tpm3P21107 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tpm3P21107 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Tpm3P21107 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tpm3P21107 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Tpm3P21107 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm3P21107 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tpm3P21107 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm3P21107 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tpm3P21107 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.16■□□□□ 0.82
Tpm3P21107 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.16■□□□□ 0.82
Tpm3P21107 Golgb1-201ENSMUST00000023534 498 ntBASIC20.16■□□□□ 0.82
Tpm3P21107 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.16■□□□□ 0.82
Tpm3P21107 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tpm3P21107 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm3P21107 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm3P21107 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.15■□□□□ 0.82
Tpm3P21107 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm3P21107 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.15■□□□□ 0.82
Tpm3P21107 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms