Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd44P15379 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd44P15379 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd44P15379 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.92■□□□□ 0.62
Cd44P15379 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd44P15379 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cd44P15379 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.91■□□□□ 0.62
Cd44P15379 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd44P15379 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cd44P15379 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd44P15379 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd44P15379 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd44P15379 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cd44P15379 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.9■□□□□ 0.62
Cd44P15379 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.9■□□□□ 0.62
Cd44P15379 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cd44P15379 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd44P15379 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.89■□□□□ 0.61
Cd44P15379 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cd44P15379 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cd44P15379 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd44P15379 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cd44P15379 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.88■□□□□ 0.61
Cd44P15379 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cd44P15379 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cd44P15379 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.88■□□□□ 0.61
Cd44P15379 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Cd44P15379 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd44P15379 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cd44P15379 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.87■□□□□ 0.61
Cd44P15379 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cd44P15379 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cd44P15379 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.87■□□□□ 0.61
Cd44P15379 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.87■□□□□ 0.61
Cd44P15379 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.87■□□□□ 0.61
Cd44P15379 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Cd44P15379 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd44P15379 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Gm8969-201ENSMUST00000199694 526 ntBASIC18.86■□□□□ 0.61
Cd44P15379 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.86■□□□□ 0.61
Cd44P15379 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd44P15379 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cd44P15379 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Cd44P15379 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cd44P15379 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cd44P15379 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cd44P15379 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Gm42778-201ENSMUST00000199644 553 ntBASIC18.85■□□□□ 0.61
Cd44P15379 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cd44P15379 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cd44P15379 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd44P15379 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
Cd44P15379 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.84■□□□□ 0.61
Cd44P15379 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms