Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Gm2559-201ENSMUST00000201323 363 ntBASIC19.86■□□□□ 0.77
Msh3P13705 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Msh3P13705 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Rarb-207ENSMUST00000225921 2756 ntBASIC19.85■□□□□ 0.77
Msh3P13705 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Msh3P13705 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.85■□□□□ 0.77
Msh3P13705 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.85■□□□□ 0.77
Msh3P13705 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.85■□□□□ 0.77
Msh3P13705 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Msh3P13705 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh3P13705 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.85■□□□□ 0.77
Msh3P13705 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Msh3P13705 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Msh3P13705 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh3P13705 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Msh3P13705 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msh3P13705 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh3P13705 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Msh3P13705 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.82■□□□□ 0.76
Msh3P13705 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msh3P13705 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.82■□□□□ 0.76
Msh3P13705 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh3P13705 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh3P13705 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh3P13705 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.82■□□□□ 0.76
Msh3P13705 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh3P13705 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.81■□□□□ 0.76
Msh3P13705 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Gm11249-201ENSMUST00000117071 859 ntBASIC19.81■□□□□ 0.76
Msh3P13705 Gm12441-201ENSMUST00000121806 588 ntBASIC19.81■□□□□ 0.76
Msh3P13705 Gm8969-201ENSMUST00000199694 526 ntBASIC19.81■□□□□ 0.76
Msh3P13705 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh3P13705 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.8■□□□□ 0.76
Msh3P13705 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.8■□□□□ 0.76
Msh3P13705 Gm20049-201ENSMUST00000219950 730 ntBASIC19.8■□□□□ 0.76
Msh3P13705 Mtag2-201ENSMUST00000058665 714 ntBASIC19.8■□□□□ 0.76
Msh3P13705 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh3P13705 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh3P13705 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh3P13705 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh3P13705 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Msh3P13705 Gm12896-201ENSMUST00000118430 226 ntBASIC19.79■□□□□ 0.76
Msh3P13705 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msh3P13705 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.79■□□□□ 0.76
Msh3P13705 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.79■□□□□ 0.76
Msh3P13705 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh3P13705 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.78■□□□□ 0.76
Msh3P13705 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh3P13705 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh3P13705 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.78■□□□□ 0.76
Msh3P13705 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.78■□□□□ 0.76
Msh3P13705 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh3P13705 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh3P13705 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh3P13705 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Msh3P13705 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh3P13705 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh3P13705 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msh3P13705 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.77■□□□□ 0.76
Msh3P13705 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.77■□□□□ 0.76
Msh3P13705 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms