Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.67■□□□□ 0.9
Polr2aP08775 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.67■□□□□ 0.9
Polr2aP08775 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2aP08775 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr2aP08775 Gm13474-201ENSMUST00000122466 815 ntBASIC20.66■□□□□ 0.9
Polr2aP08775 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.66■□□□□ 0.9
Polr2aP08775 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Polr2aP08775 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.66■□□□□ 0.9
Polr2aP08775 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.66■□□□□ 0.9
Polr2aP08775 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2aP08775 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2aP08775 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2aP08775 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.65■□□□□ 0.9
Polr2aP08775 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Polr2aP08775 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2aP08775 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.65■□□□□ 0.9
Polr2aP08775 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Polr2aP08775 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Polr2aP08775 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.64■□□□□ 0.9
Polr2aP08775 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Polr2aP08775 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.64■□□□□ 0.89
Polr2aP08775 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Polr2aP08775 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2aP08775 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.63■□□□□ 0.89
Polr2aP08775 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Polr2aP08775 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.63■□□□□ 0.89
Polr2aP08775 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2aP08775 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Polr2aP08775 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.62■□□□□ 0.89
Polr2aP08775 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.62■□□□□ 0.89
Polr2aP08775 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2aP08775 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.62■□□□□ 0.89
Polr2aP08775 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.61■□□□□ 0.89
Polr2aP08775 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Gm21559-201ENSMUST00000220638 855 ntBASIC20.61■□□□□ 0.89
Polr2aP08775 Gm8587-201ENSMUST00000076538 843 ntBASIC20.61■□□□□ 0.89
Polr2aP08775 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Polr2aP08775 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Polr2aP08775 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2aP08775 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2aP08775 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Polr2aP08775 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2aP08775 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2aP08775 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2aP08775 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms