Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxa4P06798 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxa4P06798 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Hoxa4P06798 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxa4P06798 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxa4P06798 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxa4P06798 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxa4P06798 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxa4P06798 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Hoxa4P06798 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.7■□□□□ 0.42
Hoxa4P06798 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.7■□□□□ 0.42
Hoxa4P06798 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.7■□□□□ 0.42
Hoxa4P06798 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxa4P06798 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxa4P06798 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.7■□□□□ 0.42
Hoxa4P06798 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxa4P06798 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hoxa4P06798 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxa4P06798 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxa4P06798 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.69■□□□□ 0.42
Hoxa4P06798 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa4P06798 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxa4P06798 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxa4P06798 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa4P06798 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxa4P06798 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxa4P06798 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.67■□□□□ 0.42
Hoxa4P06798 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.67■□□□□ 0.42
Hoxa4P06798 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxa4P06798 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxa4P06798 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.67■□□□□ 0.42
Hoxa4P06798 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa4P06798 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hoxa4P06798 Gm37292-201ENSMUST00000192062 758 ntBASIC17.66■□□□□ 0.42
Hoxa4P06798 Gm42545-201ENSMUST00000202755 922 ntBASIC17.66■□□□□ 0.42
Hoxa4P06798 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxa4P06798 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa4P06798 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa4P06798 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hoxa4P06798 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa4P06798 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa4P06798 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Hoxa4P06798 Gm43183-201ENSMUST00000200632 547 ntBASIC17.65■□□□□ 0.42
Hoxa4P06798 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa4P06798 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa4P06798 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms