Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PrnpP04925 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.71■□□□□ 0.59
PrnpP04925 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.71■□□□□ 0.59
PrnpP04925 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PrnpP04925 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PrnpP04925 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.71■□□□□ 0.59
PrnpP04925 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.71■□□□□ 0.59
PrnpP04925 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PrnpP04925 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrnpP04925 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PrnpP04925 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PrnpP04925 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.7■□□□□ 0.58
PrnpP04925 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.7■□□□□ 0.58
PrnpP04925 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrnpP04925 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PrnpP04925 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PrnpP04925 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PrnpP04925 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.7■□□□□ 0.58
PrnpP04925 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PrnpP04925 Gm10013-201ENSMUST00000106074 672 ntBASIC18.69■□□□□ 0.58
PrnpP04925 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.69■□□□□ 0.58
PrnpP04925 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PrnpP04925 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.69■□□□□ 0.58
PrnpP04925 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Gm7367-201ENSMUST00000057611 492 ntBASIC18.69■□□□□ 0.58
PrnpP04925 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.69■□□□□ 0.58
PrnpP04925 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PrnpP04925 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrnpP04925 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.68■□□□□ 0.58
PrnpP04925 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PrnpP04925 Gm2274-201ENSMUST00000184539 609 ntBASIC18.68■□□□□ 0.58
PrnpP04925 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.68■□□□□ 0.58
PrnpP04925 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.68■□□□□ 0.58
PrnpP04925 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PrnpP04925 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PrnpP04925 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PrnpP04925 Gm23634-201ENSMUST00000175071 91 ntBASIC18.67■□□□□ 0.58
PrnpP04925 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Gm4974-201ENSMUST00000209974 875 ntBASIC18.67■□□□□ 0.58
PrnpP04925 Gm18032-201ENSMUST00000222541 538 ntBASIC18.67■□□□□ 0.58
PrnpP04925 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PrnpP04925 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrnpP04925 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PrnpP04925 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.66■□□□□ 0.58
PrnpP04925 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PrnpP04925 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PrnpP04925 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.65■□□□□ 0.58
PrnpP04925 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.65■□□□□ 0.58
PrnpP04925 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Mir5130-201ENSMUST00000175160 84 ntBASIC18.65■□□□□ 0.58
PrnpP04925 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.65■□□□□ 0.58
PrnpP04925 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.65■□□□□ 0.58
PrnpP04925 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms