Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Cd74P04441 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cd74P04441 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.1■□□□□ 0.01
Cd74P04441 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.1■□□□□ 0.01
Cd74P04441 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.1■□□□□ 0.01
Cd74P04441 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cd74P04441 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.1■□□□□ 0.01
Cd74P04441 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cd74P04441 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Cd74P04441 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.1■□□□□ 0.01
Cd74P04441 Gm20760-201ENSMUST00000179197 648 ntBASIC15.1■□□□□ 0.01
Cd74P04441 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.1■□□□□ 0.01
Cd74P04441 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cd74P04441 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd74P04441 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.09■□□□□ 0.01
Cd74P04441 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cd74P04441 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.09■□□□□ 0.01
Cd74P04441 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.09■□□□□ 0.01
Cd74P04441 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.09■□□□□ 0.01
Cd74P04441 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Cd74P04441 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd74P04441 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cd74P04441 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cd74P04441 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cd74P04441 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Cd74P04441 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.08■□□□□ 0
Cd74P04441 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.08■□□□□ 0
Cd74P04441 Gm13148-201ENSMUST00000118892 745 ntBASIC15.08■□□□□ 0
Cd74P04441 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cd74P04441 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.08■□□□□ 0
Cd74P04441 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.08■□□□□ 0
Cd74P04441 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.08■□□□□ 0
Cd74P04441 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cd74P04441 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cd74P04441 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.07■□□□□ 0
Cd74P04441 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cd74P04441 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.07■□□□□ 0
Cd74P04441 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.07■□□□□ 0
Cd74P04441 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cd74P04441 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.07■□□□□ 0
Cd74P04441 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.07■□□□□ 0
Cd74P04441 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cd74P04441 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cd74P04441 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cd74P04441 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.06■□□□□ 0
Cd74P04441 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms