Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
P01852 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.45■□□□□ 0.22
P01852 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.45■□□□□ 0.22
P01852 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.44■□□□□ 0.22
P01852 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.44■□□□□ 0.22
P01852 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.44■□□□□ 0.22
P01852 Gm20760-201ENSMUST00000179197 648 ntBASIC16.44■□□□□ 0.22
P01852 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.44■□□□□ 0.22
P01852 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
P01852 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.43■□□□□ 0.22
P01852 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
P01852 Gm10653-202ENSMUST00000139570 835 ntBASIC16.43■□□□□ 0.22
P01852 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.43■□□□□ 0.22
P01852 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
P01852 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
P01852 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P01852 Dio3-201ENSMUST00000097228 1449 ntBASIC16.43■□□□□ 0.22
P01852 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Gm37856-201ENSMUST00000191634 999 ntBASIC16.42■□□□□ 0.22
P01852 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P01852 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P01852 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.42■□□□□ 0.22
P01852 Flg-201ENSMUST00000050758 1488 ntBASIC16.42■□□□□ 0.22
P01852 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
P01852 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.41■□□□□ 0.22
P01852 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
P01852 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.41■□□□□ 0.22
P01852 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
P01852 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.41■□□□□ 0.22
P01852 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Trmt13-210ENSMUST00000198454 880 ntBASIC16.41■□□□□ 0.22
P01852 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.41■□□□□ 0.22
P01852 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.41■□□□□ 0.22
P01852 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.41■□□□□ 0.22
P01852 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
P01852 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.41■□□□□ 0.22
P01852 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P01852 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
P01852 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms