Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.16□□□□□ -0.3
TcraP01849 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.16□□□□□ -0.3
TcraP01849 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.16□□□□□ -0.3
TcraP01849 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.16□□□□□ -0.3
TcraP01849 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TcraP01849 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TcraP01849 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TcraP01849 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.15□□□□□ -0.3
TcraP01849 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.15□□□□□ -0.3
TcraP01849 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TcraP01849 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TcraP01849 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TcraP01849 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.14□□□□□ -0.31
TcraP01849 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TcraP01849 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.14□□□□□ -0.31
TcraP01849 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.14□□□□□ -0.31
TcraP01849 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TcraP01849 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TcraP01849 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TcraP01849 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TcraP01849 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.13□□□□□ -0.31
TcraP01849 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.13□□□□□ -0.31
TcraP01849 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TcraP01849 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TcraP01849 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TcraP01849 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
TcraP01849 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.12□□□□□ -0.31
TcraP01849 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.12□□□□□ -0.31
TcraP01849 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.12□□□□□ -0.31
TcraP01849 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TcraP01849 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms