Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01808 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.3■□□□□ 0.2
P01808 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
P01808 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
P01808 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.3■□□□□ 0.2
P01808 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01808 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
P01808 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P01808 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.29■□□□□ 0.2
P01808 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.29■□□□□ 0.2
P01808 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01808 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
P01808 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.29■□□□□ 0.2
P01808 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
P01808 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P01808 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P01808 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P01808 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P01808 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.28■□□□□ 0.2
P01808 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Gm37856-201ENSMUST00000191634 999 ntBASIC16.28■□□□□ 0.2
P01808 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.28■□□□□ 0.2
P01808 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P01808 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P01808 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01808 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01808 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01808 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
P01808 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.27■□□□□ 0.2
P01808 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P01808 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
P01808 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.27■□□□□ 0.2
P01808 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.27■□□□□ 0.2
P01808 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P01808 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P01808 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
P01808 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
P01808 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.26■□□□□ 0.19
P01808 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.26■□□□□ 0.19
P01808 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
P01808 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01808 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
P01808 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.26■□□□□ 0.19
P01808 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
P01808 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.26■□□□□ 0.19
P01808 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
P01808 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms