Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CopeO89079 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CopeO89079 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopeO89079 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
CopeO89079 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CopeO89079 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.59■□□□□ 0.57
CopeO89079 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CopeO89079 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CopeO89079 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CopeO89079 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CopeO89079 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.58■□□□□ 0.57
CopeO89079 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CopeO89079 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CopeO89079 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.58■□□□□ 0.56
CopeO89079 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CopeO89079 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.58■□□□□ 0.56
CopeO89079 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CopeO89079 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CopeO89079 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.57■□□□□ 0.56
CopeO89079 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CopeO89079 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Gm13146-201ENSMUST00000118508 780 ntBASIC18.57■□□□□ 0.56
CopeO89079 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.57■□□□□ 0.56
CopeO89079 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Gm9988-201ENSMUST00000069786 435 ntBASIC18.57■□□□□ 0.56
CopeO89079 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CopeO89079 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CopeO89079 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CopeO89079 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.56■□□□□ 0.56
CopeO89079 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CopeO89079 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CopeO89079 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.56■□□□□ 0.56
CopeO89079 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CopeO89079 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.55■□□□□ 0.56
CopeO89079 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CopeO89079 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CopeO89079 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CopeO89079 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CopeO89079 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CopeO89079 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CopeO89079 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CopeO89079 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CopeO89079 Gm13534-201ENSMUST00000121169 513 ntBASIC18.54■□□□□ 0.56
CopeO89079 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.54■□□□□ 0.56
CopeO89079 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms