Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.08■□□□□ 0.17
Hdac3O88895 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Hdac3O88895 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac3O88895 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.08■□□□□ 0.16
Hdac3O88895 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Hdac3O88895 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.08■□□□□ 0.16
Hdac3O88895 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac3O88895 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hdac3O88895 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.07■□□□□ 0.16
Hdac3O88895 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.07■□□□□ 0.16
Hdac3O88895 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hdac3O88895 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hdac3O88895 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Fst-202ENSMUST00000223640 2612 ntBASIC16.07■□□□□ 0.16
Hdac3O88895 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hdac3O88895 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.06■□□□□ 0.16
Hdac3O88895 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hdac3O88895 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.05■□□□□ 0.16
Hdac3O88895 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hdac3O88895 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.05■□□□□ 0.16
Hdac3O88895 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.05■□□□□ 0.16
Hdac3O88895 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hdac3O88895 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hdac3O88895 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.05■□□□□ 0.16
Hdac3O88895 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hdac3O88895 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hdac3O88895 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hdac3O88895 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.04■□□□□ 0.16
Hdac3O88895 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.04■□□□□ 0.16
Hdac3O88895 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac3O88895 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hdac3O88895 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hdac3O88895 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.03■□□□□ 0.16
Hdac3O88895 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms