Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Gm21814-202ENSMUST00000203277 873 ntBASIC17.32■□□□□ 0.36
Best1O88870 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Best1O88870 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.31■□□□□ 0.36
Best1O88870 Odf3b-204ENSMUST00000227834 930 ntBASIC17.31■□□□□ 0.36
Best1O88870 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Best1O88870 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.31■□□□□ 0.36
Best1O88870 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Best1O88870 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Golph3-205ENSMUST00000228671 2842 ntBASIC17.3■□□□□ 0.36
Best1O88870 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Best1O88870 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Best1O88870 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.3■□□□□ 0.36
Best1O88870 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Best1O88870 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.3■□□□□ 0.36
Best1O88870 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.3■□□□□ 0.36
Best1O88870 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Best1O88870 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best1O88870 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best1O88870 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.29■□□□□ 0.36
Best1O88870 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Best1O88870 Timm23-208ENSMUST00000226683 750 ntBASIC17.29■□□□□ 0.36
Best1O88870 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Best1O88870 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Best1O88870 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.29■□□□□ 0.36
Best1O88870 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Best1O88870 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best1O88870 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Best1O88870 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best1O88870 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.28■□□□□ 0.36
Best1O88870 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.28■□□□□ 0.36
Best1O88870 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Best1O88870 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.28■□□□□ 0.36
Best1O88870 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.28■□□□□ 0.36
Best1O88870 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Best1O88870 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Best1O88870 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Best1O88870 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.28■□□□□ 0.36
Best1O88870 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best1O88870 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Best1O88870 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.27■□□□□ 0.36
Best1O88870 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Best1O88870 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Best1O88870 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Best1O88870 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.27■□□□□ 0.36
Best1O88870 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.27■□□□□ 0.36
Best1O88870 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best1O88870 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms