Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sema3fO88632 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sema3fO88632 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sema3fO88632 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.81■□□□□ 0.92
Sema3fO88632 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.81■□□□□ 0.92
Sema3fO88632 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sema3fO88632 Gm5417-201ENSMUST00000079706 384 ntBASIC20.81■□□□□ 0.92
Sema3fO88632 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sema3fO88632 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.81■□□□□ 0.92
Sema3fO88632 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sema3fO88632 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sema3fO88632 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.8■□□□□ 0.92
Sema3fO88632 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.8■□□□□ 0.92
Sema3fO88632 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3fO88632 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.79■□□□□ 0.92
Sema3fO88632 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sema3fO88632 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3fO88632 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.78■□□□□ 0.92
Sema3fO88632 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Gm13836-201ENSMUST00000121159 501 ntBASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sema3fO88632 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3fO88632 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sema3fO88632 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sema3fO88632 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sema3fO88632 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Sema3fO88632 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sema3fO88632 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sema3fO88632 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sema3fO88632 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sema3fO88632 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3fO88632 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sema3fO88632 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.76■□□□□ 0.91
Sema3fO88632 Gm7977-201ENSMUST00000193787 748 ntBASIC20.76■□□□□ 0.91
Sema3fO88632 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3fO88632 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.76■□□□□ 0.91
Sema3fO88632 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3fO88632 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.76■□□□□ 0.91
Sema3fO88632 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3fO88632 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3fO88632 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.75■□□□□ 0.91
Sema3fO88632 Gm12382-201ENSMUST00000122005 922 ntBASIC20.75■□□□□ 0.91
Sema3fO88632 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sema3fO88632 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.75■□□□□ 0.91
Sema3fO88632 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3fO88632 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.74■□□□□ 0.91
Sema3fO88632 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.74■□□□□ 0.91
Sema3fO88632 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sema3fO88632 Gm43799-201ENSMUST00000201845 579 ntBASIC20.74■□□□□ 0.91
Sema3fO88632 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sema3fO88632 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3fO88632 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sema3fO88632 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.74■□□□□ 0.91
Sema3fO88632 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sema3fO88632 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3fO88632 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3fO88632 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3fO88632 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3fO88632 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms