Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.64■□□□□ 0.25
Cops4O88544 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cops4O88544 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cops4O88544 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cops4O88544 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cops4O88544 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.64■□□□□ 0.25
Cops4O88544 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.63■□□□□ 0.25
Cops4O88544 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops4O88544 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops4O88544 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cops4O88544 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops4O88544 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Cops4O88544 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.63■□□□□ 0.25
Cops4O88544 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cops4O88544 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cops4O88544 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cops4O88544 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cops4O88544 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.62■□□□□ 0.25
Cops4O88544 Gm45417-201ENSMUST00000209533 758 ntBASIC16.62■□□□□ 0.25
Cops4O88544 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cops4O88544 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cops4O88544 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.61■□□□□ 0.25
Cops4O88544 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cops4O88544 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.61■□□□□ 0.25
Cops4O88544 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Cops4O88544 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cops4O88544 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.6■□□□□ 0.25
Cops4O88544 Gm27801-201ENSMUST00000184174 223 ntBASIC16.6■□□□□ 0.25
Cops4O88544 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.6■□□□□ 0.25
Cops4O88544 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cops4O88544 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cops4O88544 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cops4O88544 Gm6139-201ENSMUST00000079261 882 ntBASIC16.59■□□□□ 0.25
Cops4O88544 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.59■□□□□ 0.25
Cops4O88544 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cops4O88544 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Cops4O88544 Gm26833-201ENSMUST00000180899 440 ntBASIC16.58■□□□□ 0.24
Cops4O88544 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.58■□□□□ 0.24
Cops4O88544 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops4O88544 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cops4O88544 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cops4O88544 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms