Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.58■□□□□ 0.4
Cacna1hO88427 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1hO88427 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.57■□□□□ 0.4
Cacna1hO88427 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1hO88427 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1hO88427 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1hO88427 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Cacna1hO88427 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacna1hO88427 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.56■□□□□ 0.4
Cacna1hO88427 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacna1hO88427 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.56■□□□□ 0.4
Cacna1hO88427 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.56■□□□□ 0.4
Cacna1hO88427 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1hO88427 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.55■□□□□ 0.4
Cacna1hO88427 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
Cacna1hO88427 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1hO88427 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cacna1hO88427 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Cacna1hO88427 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.54■□□□□ 0.4
Cacna1hO88427 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.54■□□□□ 0.4
Cacna1hO88427 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.54■□□□□ 0.4
Cacna1hO88427 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.54■□□□□ 0.4
Cacna1hO88427 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Gm43575-201ENSMUST00000196420 516 ntBASIC17.54■□□□□ 0.4
Cacna1hO88427 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1hO88427 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
Cacna1hO88427 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cacna1hO88427 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cacna1hO88427 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cacna1hO88427 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Gm27702-201ENSMUST00000184512 56 ntBASIC17.53■□□□□ 0.4
Cacna1hO88427 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.53■□□□□ 0.4
Cacna1hO88427 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.53■□□□□ 0.4
Cacna1hO88427 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.53■□□□□ 0.4
Cacna1hO88427 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1hO88427 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cacna1hO88427 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Gm7213-201ENSMUST00000215977 950 ntBASIC17.52■□□□□ 0.4
Cacna1hO88427 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cacna1hO88427 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1hO88427 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cacna1hO88427 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1hO88427 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1hO88427 Gm11452-201ENSMUST00000122376 690 ntBASIC17.52■□□□□ 0.39
Cacna1hO88427 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1hO88427 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.52■□□□□ 0.39
Cacna1hO88427 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.52■□□□□ 0.39
Cacna1hO88427 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.52■□□□□ 0.39
Cacna1hO88427 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1hO88427 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms