Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.34■□□□□ 0.21
Pdlim3O70209 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.34■□□□□ 0.21
Pdlim3O70209 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim3O70209 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim3O70209 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim3O70209 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim3O70209 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim3O70209 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.33■□□□□ 0.2
Pdlim3O70209 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pdlim3O70209 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim3O70209 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Gm27454-201ENSMUST00000185090 204 ntBASIC16.32■□□□□ 0.2
Pdlim3O70209 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Pdlim3O70209 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.32■□□□□ 0.2
Pdlim3O70209 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim3O70209 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.31■□□□□ 0.2
Pdlim3O70209 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdlim3O70209 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.31■□□□□ 0.2
Pdlim3O70209 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.31■□□□□ 0.2
Pdlim3O70209 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.31■□□□□ 0.2
Pdlim3O70209 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim3O70209 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdlim3O70209 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pdlim3O70209 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdlim3O70209 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms