Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Mmp8O70138 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Mmp8O70138 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Mmp8O70138 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.02■■□□□ 1.11
Mmp8O70138 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Mmp8O70138 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.01■■□□□ 1.11
Mmp8O70138 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Gm13158-201ENSMUST00000122007 736 ntBASIC22.01■■□□□ 1.11
Mmp8O70138 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Gm10138-203ENSMUST00000206952 366 ntBASIC22.01■■□□□ 1.11
Mmp8O70138 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.01■■□□□ 1.11
Mmp8O70138 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Mmp8O70138 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.01■■□□□ 1.11
Mmp8O70138 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Mmp8O70138 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp8O70138 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22■■□□□ 1.11
Mmp8O70138 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Mmp8O70138 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Mmp8O70138 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Mmp8O70138 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.99■■□□□ 1.11
Mmp8O70138 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Mmp8O70138 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Mmp8O70138 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Mmp8O70138 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Mmp8O70138 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.98■■□□□ 1.11
Mmp8O70138 Gm20760-201ENSMUST00000179197 648 ntBASIC21.98■■□□□ 1.11
Mmp8O70138 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.98■■□□□ 1.11
Mmp8O70138 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Mmp8O70138 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Mmp8O70138 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.97■■□□□ 1.11
Mmp8O70138 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.97■■□□□ 1.11
Mmp8O70138 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Gm5643-201ENSMUST00000117081 966 ntBASIC21.97■■□□□ 1.11
Mmp8O70138 Gm15375-201ENSMUST00000119510 849 ntBASIC21.97■■□□□ 1.11
Mmp8O70138 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.97■■□□□ 1.11
Mmp8O70138 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Mmp8O70138 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.97■■□□□ 1.11
Mmp8O70138 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.97■■□□□ 1.11
Mmp8O70138 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Mmp8O70138 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.97■■□□□ 1.11
Mmp8O70138 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Mmp8O70138 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp8O70138 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.96■■□□□ 1.11
Mmp8O70138 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Mmp8O70138 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Mmp8O70138 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Mmp8O70138 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Mmp8O70138 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.96■■□□□ 1.11
Mmp8O70138 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
Mmp8O70138 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Mmp8O70138 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Mir6349-201ENSMUST00000184059 97 ntBASIC21.95■■□□□ 1.1
Mmp8O70138 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Mmp8O70138 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.95■■□□□ 1.1
Mmp8O70138 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.95■■□□□ 1.1
Mmp8O70138 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp8O70138 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms