Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.33■□□□□ 0.21
Alx3O70137 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Alx3O70137 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Alx3O70137 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Alx3O70137 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.33■□□□□ 0.2
Alx3O70137 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.33■□□□□ 0.2
Alx3O70137 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Alx3O70137 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Alx3O70137 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
Alx3O70137 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx3O70137 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.32■□□□□ 0.2
Alx3O70137 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.32■□□□□ 0.2
Alx3O70137 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx3O70137 Gm42778-201ENSMUST00000199644 553 ntBASIC16.32■□□□□ 0.2
Alx3O70137 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.32■□□□□ 0.2
Alx3O70137 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Alx3O70137 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx3O70137 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Alx3O70137 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.32■□□□□ 0.2
Alx3O70137 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.32■□□□□ 0.2
Alx3O70137 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.32■□□□□ 0.2
Alx3O70137 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Alx3O70137 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Alx3O70137 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alx3O70137 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Alx3O70137 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.31■□□□□ 0.2
Alx3O70137 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.31■□□□□ 0.2
Alx3O70137 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.31■□□□□ 0.2
Alx3O70137 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Alx3O70137 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Alx3O70137 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx3O70137 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC16.3■□□□□ 0.2
Alx3O70137 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.3■□□□□ 0.2
Alx3O70137 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx3O70137 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.29■□□□□ 0.2
Alx3O70137 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.29■□□□□ 0.2
Alx3O70137 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.29■□□□□ 0.2
Alx3O70137 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Alx3O70137 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Alx3O70137 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.29■□□□□ 0.2
Alx3O70137 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Alx3O70137 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx3O70137 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms