Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trdmt1O55055 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trdmt1O55055 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trdmt1O55055 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.89■□□□□ 0.77
Trdmt1O55055 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trdmt1O55055 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trdmt1O55055 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.89■□□□□ 0.77
Trdmt1O55055 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trdmt1O55055 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 BC021767-201ENSMUST00000126387 1716 ntBASIC19.88■□□□□ 0.77
Trdmt1O55055 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.88■□□□□ 0.77
Trdmt1O55055 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trdmt1O55055 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdmt1O55055 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trdmt1O55055 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Gm23634-201ENSMUST00000175071 91 ntBASIC19.87■□□□□ 0.77
Trdmt1O55055 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.87■□□□□ 0.77
Trdmt1O55055 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.87■□□□□ 0.77
Trdmt1O55055 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Gm7367-201ENSMUST00000057611 492 ntBASIC19.87■□□□□ 0.77
Trdmt1O55055 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trdmt1O55055 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.87■□□□□ 0.77
Trdmt1O55055 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trdmt1O55055 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trdmt1O55055 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
Trdmt1O55055 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trdmt1O55055 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trdmt1O55055 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trdmt1O55055 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.86■□□□□ 0.77
Trdmt1O55055 Gm4974-201ENSMUST00000209974 875 ntBASIC19.86■□□□□ 0.77
Trdmt1O55055 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trdmt1O55055 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.86■□□□□ 0.77
Trdmt1O55055 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trdmt1O55055 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trdmt1O55055 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.86■□□□□ 0.77
Trdmt1O55055 Gm10013-201ENSMUST00000106074 672 ntBASIC19.85■□□□□ 0.77
Trdmt1O55055 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trdmt1O55055 Gm2274-201ENSMUST00000184539 609 ntBASIC19.85■□□□□ 0.77
Trdmt1O55055 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trdmt1O55055 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trdmt1O55055 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trdmt1O55055 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Mir5130-201ENSMUST00000175160 84 ntBASIC19.84■□□□□ 0.77
Trdmt1O55055 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.84■□□□□ 0.77
Trdmt1O55055 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trdmt1O55055 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdmt1O55055 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.84■□□□□ 0.77
Trdmt1O55055 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trdmt1O55055 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Trdmt1O55055 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trdmt1O55055 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.83■□□□□ 0.77
Trdmt1O55055 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trdmt1O55055 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trdmt1O55055 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trdmt1O55055 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.83■□□□□ 0.77
Trdmt1O55055 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trdmt1O55055 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trdmt1O55055 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trdmt1O55055 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trdmt1O55055 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trdmt1O55055 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms