Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Copb2O55029 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Copb2O55029 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.68■□□□□ 0.9
Copb2O55029 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.68■□□□□ 0.9
Copb2O55029 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Copb2O55029 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.68■□□□□ 0.9
Copb2O55029 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.68■□□□□ 0.9
Copb2O55029 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.67■□□□□ 0.9
Copb2O55029 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Copb2O55029 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Copb2O55029 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Copb2O55029 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.67■□□□□ 0.9
Copb2O55029 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Copb2O55029 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb2O55029 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.66■□□□□ 0.9
Copb2O55029 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Copb2O55029 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.66■□□□□ 0.9
Copb2O55029 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.66■□□□□ 0.9
Copb2O55029 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.66■□□□□ 0.9
Copb2O55029 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Copb2O55029 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Copb2O55029 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Copb2O55029 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Gm5417-201ENSMUST00000079706 384 ntBASIC20.65■□□□□ 0.9
Copb2O55029 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Copb2O55029 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Copb2O55029 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Copb2O55029 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.64■□□□□ 0.9
Copb2O55029 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Mir6349-201ENSMUST00000184059 97 ntBASIC20.64■□□□□ 0.89
Copb2O55029 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Copb2O55029 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.64■□□□□ 0.89
Copb2O55029 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Copb2O55029 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Copb2O55029 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Copb2O55029 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Copb2O55029 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Copb2O55029 Gm12382-201ENSMUST00000122005 922 ntBASIC20.63■□□□□ 0.89
Copb2O55029 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Copb2O55029 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Copb2O55029 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Copb2O55029 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Copb2O55029 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Copb2O55029 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Copb2O55029 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.62■□□□□ 0.89
Copb2O55029 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Copb2O55029 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Copb2O55029 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Copb2O55029 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.62■□□□□ 0.89
Copb2O55029 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.62■□□□□ 0.89
Copb2O55029 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.62■□□□□ 0.89
Copb2O55029 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Copb2O55029 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Copb2O55029 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Copb2O55029 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Copb2O55029 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms