Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm2O35900 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm2O35900 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm2O35900 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lsm2O35900 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.07■□□□□ 0.16
Lsm2O35900 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm2O35900 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm2O35900 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm2O35900 Idnk-204ENSMUST00000226010 1898 ntBASIC16.06■□□□□ 0.16
Lsm2O35900 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.06■□□□□ 0.16
Lsm2O35900 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm2O35900 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm2O35900 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm2O35900 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm2O35900 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm2O35900 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.05■□□□□ 0.16
Lsm2O35900 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm2O35900 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm2O35900 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm2O35900 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm2O35900 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm2O35900 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.04■□□□□ 0.16
Lsm2O35900 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
Lsm2O35900 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsm2O35900 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Lsm2O35900 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.04■□□□□ 0.16
Lsm2O35900 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm2O35900 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.03■□□□□ 0.16
Lsm2O35900 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsm2O35900 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Haglr-201ENSMUST00000100000 2085 ntBASIC16.03■□□□□ 0.16
Lsm2O35900 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.03■□□□□ 0.16
Lsm2O35900 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm2O35900 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lsm2O35900 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lsm2O35900 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.02■□□□□ 0.16
Lsm2O35900 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm2O35900 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lsm2O35900 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm2O35900 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm2O35900 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm2O35900 Gm43173-201ENSMUST00000202246 593 ntBASIC16.02■□□□□ 0.16
Lsm2O35900 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm2O35900 Rps24-207ENSMUST00000224568 714 ntBASIC16.02■□□□□ 0.16
Lsm2O35900 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Lsm2O35900 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm2O35900 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.02■□□□□ 0.15
Lsm2O35900 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.01■□□□□ 0.15
Lsm2O35900 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm2O35900 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm2O35900 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm2O35900 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms