Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sptlc1O35704 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.7■□□□□ 0.74
Sptlc1O35704 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.69■□□□□ 0.74
Sptlc1O35704 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sptlc1O35704 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptlc1O35704 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Sptlc1O35704 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sptlc1O35704 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.68■□□□□ 0.74
Sptlc1O35704 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.68■□□□□ 0.74
Sptlc1O35704 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.68■□□□□ 0.74
Sptlc1O35704 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sptlc1O35704 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptlc1O35704 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.68■□□□□ 0.74
Sptlc1O35704 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.67■□□□□ 0.74
Sptlc1O35704 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.67■□□□□ 0.74
Sptlc1O35704 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptlc1O35704 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sptlc1O35704 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptlc1O35704 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptlc1O35704 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sptlc1O35704 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.67■□□□□ 0.74
Sptlc1O35704 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptlc1O35704 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sptlc1O35704 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sptlc1O35704 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Sptlc1O35704 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.66■□□□□ 0.74
Sptlc1O35704 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sptlc1O35704 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.65■□□□□ 0.74
Sptlc1O35704 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sptlc1O35704 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.65■□□□□ 0.74
Sptlc1O35704 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.65■□□□□ 0.74
Sptlc1O35704 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sptlc1O35704 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sptlc1O35704 AC154532.1-201ENSMUST00000227860 965 ntBASIC19.65■□□□□ 0.74
Sptlc1O35704 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sptlc1O35704 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sptlc1O35704 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Sptlc1O35704 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sptlc1O35704 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptlc1O35704 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sptlc1O35704 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms