Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1i3O35627 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.34■□□□□ 0.69
Nr1i3O35627 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1i3O35627 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1i3O35627 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1i3O35627 Idnk-204ENSMUST00000226010 1898 ntBASIC19.33■□□□□ 0.69
Nr1i3O35627 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1i3O35627 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.33■□□□□ 0.68
Nr1i3O35627 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.33■□□□□ 0.68
Nr1i3O35627 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1i3O35627 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.32■□□□□ 0.68
Nr1i3O35627 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nr1i3O35627 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1i3O35627 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
Nr1i3O35627 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm10849-201ENSMUST00000100397 618 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm7290-201ENSMUST00000104990 617 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm12918-201ENSMUST00000120234 636 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm15710-201ENSMUST00000121821 636 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm5075-201ENSMUST00000196916 622 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nr1i3O35627 Gm6365-201ENSMUST00000054711 744 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.31■□□□□ 0.68
Nr1i3O35627 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1i3O35627 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nr1i3O35627 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nr1i3O35627 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.3■□□□□ 0.68
Nr1i3O35627 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1i3O35627 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nr1i3O35627 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.29■□□□□ 0.68
Nr1i3O35627 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.29■□□□□ 0.68
Nr1i3O35627 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.29■□□□□ 0.68
Nr1i3O35627 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1i3O35627 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nr1i3O35627 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms