Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc1a6O35544 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Slc1a6O35544 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Slc1a6O35544 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc1a6O35544 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.76■□□□□ 0.43
Slc1a6O35544 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc1a6O35544 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.75■□□□□ 0.43
Slc1a6O35544 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
Slc1a6O35544 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc1a6O35544 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc1a6O35544 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc1a6O35544 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc1a6O35544 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slc1a6O35544 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc1a6O35544 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc1a6O35544 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Gm13534-201ENSMUST00000121169 513 ntBASIC17.73■□□□□ 0.43
Slc1a6O35544 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc1a6O35544 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc1a6O35544 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc1a6O35544 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.73■□□□□ 0.43
Slc1a6O35544 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.72■□□□□ 0.43
Slc1a6O35544 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc1a6O35544 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc1a6O35544 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.71■□□□□ 0.43
Slc1a6O35544 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Slc1a6O35544 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Gm22325-201ENSMUST00000158904 308 ntBASIC17.71■□□□□ 0.43
Slc1a6O35544 Gm27454-201ENSMUST00000185090 204 ntBASIC17.71■□□□□ 0.43
Slc1a6O35544 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.71■□□□□ 0.43
Slc1a6O35544 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms