Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tnfsf11O35235 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf11O35235 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.04□□□□□ -0.16
Tnfsf11O35235 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.04□□□□□ -0.16
Tnfsf11O35235 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.04□□□□□ -0.16
Tnfsf11O35235 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf11O35235 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf11O35235 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf11O35235 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf11O35235 Spcs1-204ENSMUST00000226782 949 ntBASIC14.02□□□□□ -0.17
Tnfsf11O35235 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf11O35235 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf11O35235 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf11O35235 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms