Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf2O35218 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf2O35218 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cpsf2O35218 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf2O35218 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf2O35218 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf2O35218 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf2O35218 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf2O35218 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.21■□□□□ 0.67
Cpsf2O35218 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Cpsf2O35218 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.21■□□□□ 0.67
Cpsf2O35218 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.21■□□□□ 0.67
Cpsf2O35218 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf2O35218 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Cpsf2O35218 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf2O35218 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Tgds-204ENSMUST00000228543 1594 ntBASIC19.2■□□□□ 0.66
Cpsf2O35218 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.2■□□□□ 0.66
Cpsf2O35218 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf2O35218 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cpsf2O35218 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf2O35218 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cpsf2O35218 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpsf2O35218 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf2O35218 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf2O35218 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.18■□□□□ 0.66
Cpsf2O35218 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cpsf2O35218 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpsf2O35218 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Cpsf2O35218 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.18■□□□□ 0.66
Cpsf2O35218 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf2O35218 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf2O35218 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf2O35218 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cpsf2O35218 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.17■□□□□ 0.66
Cpsf2O35218 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.17■□□□□ 0.66
Cpsf2O35218 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf2O35218 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf2O35218 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Cpsf2O35218 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf2O35218 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cpsf2O35218 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.16■□□□□ 0.66
Cpsf2O35218 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf2O35218 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Cpsf2O35218 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.15■□□□□ 0.66
Cpsf2O35218 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf2O35218 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms