Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.48□□□□□ -0.57
Pkd1O08852 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.48□□□□□ -0.57
Pkd1O08852 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC11.48□□□□□ -0.57
Pkd1O08852 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pkd1O08852 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pkd1O08852 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.48□□□□□ -0.57
Pkd1O08852 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pkd1O08852 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC11.48□□□□□ -0.57
Pkd1O08852 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pkd1O08852 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Pkd1O08852 Gm15794-201ENSMUST00000120182 631 ntBASIC11.47□□□□□ -0.57
Pkd1O08852 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.47□□□□□ -0.57
Pkd1O08852 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.47□□□□□ -0.57
Pkd1O08852 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.47□□□□□ -0.57
Pkd1O08852 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.47□□□□□ -0.57
Pkd1O08852 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Gm18688-201ENSMUST00000204695 1859 ntBASIC11.47□□□□□ -0.57
Pkd1O08852 Gm13474-201ENSMUST00000122466 815 ntBASIC11.47□□□□□ -0.57
Pkd1O08852 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.47□□□□□ -0.57
Pkd1O08852 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.47□□□□□ -0.57
Pkd1O08852 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pkd1O08852 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Pkd1O08852 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.47□□□□□ -0.57
Pkd1O08852 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pkd1O08852 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pkd1O08852 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.46□□□□□ -0.57
Pkd1O08852 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.46□□□□□ -0.57
Pkd1O08852 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC11.46□□□□□ -0.57
Pkd1O08852 Gm38345-201ENSMUST00000192635 1748 ntBASIC11.46□□□□□ -0.57
Pkd1O08852 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.46□□□□□ -0.57
Pkd1O08852 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkd1O08852 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC11.46□□□□□ -0.57
Pkd1O08852 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pkd1O08852 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Pkd1O08852 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Pkd1O08852 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Pkd1O08852 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.46□□□□□ -0.58
Pkd1O08852 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.46□□□□□ -0.58
Pkd1O08852 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkd1O08852 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pkd1O08852 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.45□□□□□ -0.58
Pkd1O08852 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.45□□□□□ -0.58
Pkd1O08852 Gm6443-201ENSMUST00000203599 874 ntBASIC11.45□□□□□ -0.58
Pkd1O08852 Hsf1-207ENSMUST00000228371 2102 ntBASIC11.45□□□□□ -0.58
Pkd1O08852 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.45□□□□□ -0.58
Pkd1O08852 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pkd1O08852 Birc2-201ENSMUST00000054878 378 ntBASIC11.45□□□□□ -0.58
Pkd1O08852 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.45□□□□□ -0.58
Pkd1O08852 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pkd1O08852 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.45□□□□□ -0.58
Pkd1O08852 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkd1O08852 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.44□□□□□ -0.58
Pkd1O08852 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pkd1O08852 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pkd1O08852 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pkd1O08852 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms