Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trove2O08848 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trove2O08848 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.45■□□□□ 0.54
Trove2O08848 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Trove2O08848 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.45■□□□□ 0.54
Trove2O08848 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trove2O08848 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trove2O08848 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trove2O08848 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trove2O08848 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.44■□□□□ 0.54
Trove2O08848 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.44■□□□□ 0.54
Trove2O08848 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trove2O08848 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trove2O08848 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.43■□□□□ 0.54
Trove2O08848 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.43■□□□□ 0.54
Trove2O08848 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.43■□□□□ 0.54
Trove2O08848 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.43■□□□□ 0.54
Trove2O08848 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trove2O08848 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.43■□□□□ 0.54
Trove2O08848 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.42■□□□□ 0.54
Trove2O08848 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trove2O08848 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.42■□□□□ 0.54
Trove2O08848 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trove2O08848 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trove2O08848 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trove2O08848 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Gm7860-201ENSMUST00000121190 879 ntBASIC18.41■□□□□ 0.54
Trove2O08848 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.41■□□□□ 0.54
Trove2O08848 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.41■□□□□ 0.54
Trove2O08848 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trove2O08848 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trove2O08848 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trove2O08848 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trove2O08848 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trove2O08848 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.4■□□□□ 0.54
Trove2O08848 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trove2O08848 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trove2O08848 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.4■□□□□ 0.54
Trove2O08848 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms