Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.13■□□□□ 0.33
Sh3yl1O08641 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.13■□□□□ 0.33
Sh3yl1O08641 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.13■□□□□ 0.33
Sh3yl1O08641 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3yl1O08641 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Rab3c-203ENSMUST00000224180 967 ntBASIC17.12■□□□□ 0.33
Sh3yl1O08641 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3yl1O08641 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.12■□□□□ 0.33
Sh3yl1O08641 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3yl1O08641 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.1■□□□□ 0.33
Sh3yl1O08641 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.1■□□□□ 0.33
Sh3yl1O08641 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3yl1O08641 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.09■□□□□ 0.33
Sh3yl1O08641 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.09■□□□□ 0.33
Sh3yl1O08641 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3yl1O08641 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3yl1O08641 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3yl1O08641 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3yl1O08641 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3yl1O08641 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3yl1O08641 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3yl1O08641 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3yl1O08641 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3yl1O08641 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3yl1O08641 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms